| 数据名称 | 数据库目录 | 数据类型 | 数据库链接 |
| PROSITE | Gene genome and annotation | Protein | http://prosite.expasy.org/ |
| DrugBank | Health and medicine | Protein | http://www.drugbank.ca/ |
| Greengenes | Gene genome and annotation | RNA | http://greengenes.lbl.gov |
| 1000 Genomes | Genotype phenotype and variation | DNA | http://browser.1000genomes.org |
| CAZy | Gene genome and annotation | Protein | http://www.cazy.org/ |
| SMART | Gene genome and annotation / Structure | Protein | http://smart.embl.de |
| BioGRID | Interaction / Literature / Modification | DNA / Protein | https://thebiogrid.org |
| SCOP | Structure | Protein | http://scop.mrc-lmb.cam.ac.uk |
| dbSNP | Genotype phenotype and variation | DNA | http://www.ncbi.nlm.nih.gov/SNP/ |
| HMDB | Pathway | Other / Protein | http://www.hmdb.ca/ |
| GtoPdb | Health and medicine / Interaction | Protein | http://www.guidetopharmacology.org/ |
| JASPAR | Interaction | DNA / Protein | http://jaspar.genereg.net/ |
| Rfam | Gene genome and annotation | RNA | http://rfam.org/ |
| EzTaxon-e | Phylogeny and homology | DNA / RNA | https://www.ezbiocloud.net/ |
| FlyBase | Gene genome and annotation | DNA / Protein / RNA | https://flybase.org |
| Reactome | Pathway | DNA / Other / Protein / RNA | https://www.reactome.org/ |
| PDB | Raw bio-data / Structure | Protein | http://www.wwpdb.org/ |
| Ensembl Genomes | Gene genome and annotation | DNA / Protein / RNA | http://ensemblgenomes.org/ |
| OMIM | Genotype phenotype and variation / Health and medicine | DNA | http://www.omim.org/ |
| MEROPS | Gene genome and annotation / Metadata | DNA / Protein | http://www.ebi.ac.uk/merops |
| FANTOM | Expression / Gene genome and annotation | DNA / RNA | http://fantom.gsc.riken.jp/ |
| HPRD | Gene genome and annotation | Protein | http://www.hprd.org/ |
| HGMD | Health and medicine | DNA | http://www.hgmd.org |
| TCGA | Expression / Genotype phenotype and variation / Health and medicine / Modification / Structure | DNA / Protein / RNA | https://www.cancer.gov/about-nci/organization/ccg/research/structural-genomics/tcga |
| PubChem | Health and medicine / Structure | Other | https://pubchem.ncbi.nlm.nih.gov/ |
| ExPASy | Metadata | Other | http://www.expasy.org |
| ClinVar | Genotype phenotype and variation / Health and medicine | DNA | http://www.ncbi.nlm.nih.gov/clinvar/ |
| MetaCyc database | Pathway | Other / Protein | http://metacyc.org/ |
| MGD | Gene genome and annotation / Health and medicine | DNA | http://www.informatics.jax.org/ |
